Nrrd ITK-SCIFIO Bug

Curtis Rueden ctrueden at wisc.edu
Tue Jul 2 14:10:15 CDT 2013


Hi Kedar,

Thanks for exercising the new code! I have a question, and a request.
First, the latter: we just created a new SCIFIO mailing list (CCed). Can we
please discuss these technical issues on the public list from now on?

And my question: can you describe your need for the Vector image type in a
little more detail? From my (limited) perspective,  using an ITK vector
image type to represent multiple N-D Image blocks, which may have differing
dimensional extents, is fundamentally unworkable. Is there another way to
accomplish your goals?

Regards,
Curtis

P.S. I spoke with Mark this morning about a possible alternative approach
for requesting specific Images (i.e. "series") from the SCIFIO ImageIO:
encode it in the file path string somehow.
 On Jul 2, 2013 1:24 PM, "Kedar Grama" <gbkedar at gmail.com> wrote:

> Hi Mark,
>
> Thanks for working on the vector image support through SCIFIO. I have
> shared a nrrd file with you on google docs. When I read it with the
> ITK-SCIFIO reader it switches the bit ordering LittleEndian/BigEndian
> whereas if I read it in Fiji or build ITK without SCIFIO it is read
> properly. To test this you can use the ITK reader example and write the
> image out as a tiff while building with/without SCIFIO.
>
> Thanks,
>
> -Kedar
>
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