[SCIFIO] Imaris writer in FIJI

Mark Hiner hiner at wisc.edu
Fri Mar 6 10:24:51 CST 2015


Hi all,

>Unfortunately, in my tests just now, there are bugs. I filed some issues
for them:
>
> * https://github.com/scifio/scifio/issues/261
> * https://github.com/scifio/scifio/issues/262

For anyone who's interested, these issues are now fixed on master branches
and can be tested by enabling the SCIFIO-dev update site[1,2]

Thanks!
- Mark

[1] http://imagej.net/How_to_follow_a_3rd_party_update_site
[2] http://imagej.net/List_of_update_sites



On Mon, Mar 2, 2015 at 10:38 AM, Curtis Rueden <ctrueden at wisc.edu> wrote:

> Hi Henry,
>
> > Has the Imaris writer been adde to FIJI yet?
>
> Yes, it was added on February 3.
>
> > Where should I look to find it--in the save as menu?
>
> No one added an ImageJ command for it, so it will not be in the menus. (We
> learned that having a separate menu item for every file format does not
> scale well.)
>
> Rather, the writer will be invoked automatically by the File > Export >
> Image... command when a file with extension .ims is specified.
>
> Unfortunately, in my tests just now, there are bugs. I filed some issues
> for them:
>
> * https://github.com/scifio/scifio/issues/261
> * https://github.com/scifio/scifio/issues/262
>
> We will investigate these problems later this week.
>
> Regards,
> Curtis
>
> On Mon, Mar 2, 2015 at 10:13 AM, Henry Pinkard <henry.pinkard at gmail.com>
> wrote:
>
>> Hi Curtis and Mark,
>>
>> Has the Imaris writer been adde to FIJI yet? Where should I look to find
>> it--in the save as menu?
>>
>> Best,
>> Henry
>>
>> _______________________________________________
>> SCIFIO mailing list
>> SCIFIO at scif.io
>> http://scif.io/mailman/listinfo/scifio
>>
>>
>
> _______________________________________________
> SCIFIO mailing list
> SCIFIO at scif.io
> http://scif.io/mailman/listinfo/scifio
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://scif.io/pipermail/scifio/attachments/20150306/cc04fb80/attachment-0002.html>


More information about the SCIFIO mailing list